Bioinformatics analysis of T- and B-combined epitopes of OMP31 protein of Brucella melitensis in Xinjiang, China
نویسندگان
چکیده
Brucellosis is one of the major zoonoses in the word that widely inflicts health problems in animal and human. In China, brucellosis is gradually increasing in recent years, especially in the xinjiang. Therefore, this study is to predict Brucella T-and B-combined epitopes of OMP31 protein by bioinformatics software. B-cell epitopes of OMP31 protein is predicted using DNAStar and IEDB software. The prediction of T-cell epitopes of OMP31 protein is performed by SYFPEITHI and ProPred MHC Class-II Binding Peptide Prediction Server. The results suggest that some position of OMP31 protein has several higher antigen indexes. The high-scoring of dominant B-cell epitopes were located at positions 25-31, 108-114, 201-207, 152-157, 166-172, 230-238, 123-127, 96-102 and 171-176. Five potential of dominant T-cell epitopes regions were revealed, located at positions 19-30, 92-106, 106-114, 137-179, 196-228. Finally, OMP31 protein has selected the three advantages of Tand B-combined epitopes, respectively are: 108-114, 152-157, 171-176. The bioinformatics research of OMP31 protein and Tand B-combined epitopes laid to the foundation of dominant epitopes vaccine.
منابع مشابه
In silico cloning and bioinformatics study of Brucella melitensis Omp31 antigen in different mammalian expression vectors
Brucella melitensis, as a pathogenic gram-negative intracellular bacterium, causes brucellosis in animals and humans. According to literature, the B. melitensis outer membrane protein 31 (Omp31) is considered as an important vaccine candidate against brucellosis. The aim of the current study was to compare three different expression constructs containing B. melitensis Omp31 antigen using bioinf...
متن کاملCloning and molecular characterization of Omp31 gene from Brucella melitensis Rev 1 strain
Brucellosis, caused by the genus Brucella bacterium, is a well-known infection among domestic animals. Considering the serious economic and medical consequences of this infection, various preventive efforts have been made through using recombinant vaccines, based on outer membrane protein (OMP) antigens of Brucella species. The objective of the present study was to clone, analyze the sequence, ...
متن کاملIn silico analysis of chimeric TF, Omp31 and BP26 fragments of Brucella melitensis for development of a multi subunit vaccine candidate
Objective(s):Brucellosis, especially caused by Brucella melitensis, remains one of the most common zoonotic diseases worldwide with more than 500,000 human cases reported annually. The commonly used live attenuated vaccine in ovine brucellosis prophylaxis is B. melitensis Rev1. But due to different problems caused by the administration of this vaccine, a protective subunit vaccine against B. me...
متن کاملB and T-Cell Epitope Prediction of the OMP25 Antigen for Developing Brucella melitensis Vaccines for Sheep
Brucellosis, produced by Brucella species, is a disease that causes severe economic losses for livestock farms worldwide Due to serious economic and medical consequences of this disease, many efforts have been made to prevent the infection through the use of recombinant vaccines based on Brucella outer membrane protein (OMP) antigens. In the present study, a wide range of on-line prediction sof...
متن کاملCloning, molecular analysis and epitopics prediction of a new chaperone GroEL Brucella melitensis antigen
Objective(s):Brucellosis is a well-known domestic animal infectious disease, which is caused by Brucella bacterium. GroEL antigen increases Brucella survival and is one of the major antigens that stimulates the immune system. Hence, the objective of the present study was cloning and bioinformatics analysis of GroEL gene. Materials and Methods: The full-length open reading frame of this gene was...
متن کامل